Open-Source Resources
Tools and datasets developed by the Microbiome Green Revolution team.
Project Resources
We are committed to open science. Below are links to GitHub repositories and tools that have been created or are used by the Microbiome Green Revolution project.
- Sample Protocols — Sampling protocols for cataloguing and managing microbial samples.
- Data Standards — Data collection and storage standards for researchers contributing new data to the project.
- ARUA Workshop 2025 — A five-day workshop to unite ARUA scientists for training and collaboration in microbiome research, developed by MGR team members.
- SimpleMetaPipeline — A metagenomic analysis pipeline, useful for analysing microbial communities collected by the MGR project.
- The Multilingual Quantitative Biologist — Useful resources for all to learn about data science and ecoinformatics.
If you use these resources, please cite the corresponding publications or get in touch with us for collaboration opportunities.